Uncovering the basis of protein-protein interaction specificity with a combinatorially complete library | eLife
SPServer: split-statistical potentials for the analysis of protein structures and protein–protein interactions | BMC Bioinformatics | Full Text
Recent advances in predicting and modeling protein–protein interactions: Trends in Biochemical Sciences
Frontiers | Protein Interface Complementarity and Gene Duplication Improve Link Prediction of Protein-Protein Interaction Network
Classification and prediction of protein–protein interaction interface using machine learning algorithm | Scientific Reports
Software for Deep Analysis of PDB Structures and Mechanism Discovery
Binding mode of each peptide-protein complex using Protein Interaction... | Download Scientific Diagram
Fast Calculation of Protein–Protein Binding Free Energies Using Umbrella Sampling with a Coarse-Grained Model | Journal of Chemical Theory and Computation
New Score Assesses Protein-Protein Interfaces
Protein protein interactions | PPT
Large-scale discovery of protein interactions at residue resolution using co-evolution calculated from genomic sequences | Nature Communications
Finding the ΔΔG spot: Are predictors of binding affinity changes upon mutations in protein–protein interactions ready for it? - Geng - 2019 - WIREs Computational Molecular Science - Wiley Online Library
Molsoft L.L.C.: Protein Structure Analysis
Computational prediction of protein–protein binding affinities - Siebenmorgen - 2020 - WIREs Computational Molecular Science - Wiley Online Library
Identification of direct residue contacts in protein–protein interaction by message passing | PNAS
EvoDesign: Designing Protein–Protein Binding Interactions Using Evolutionary Interface Profiles in Conjunction with an Optimized Physical Energy Function - ScienceDirect
Arpeggio: A Web Server for Calculating and Visualising Interatomic Interactions in Protein Structures | Semantic Scholar
Assessment of protein–protein interfaces in cryo-EM derived assemblies | Nature Communications
Identifying protein-protein interface via a novel multi-scale local sequence and structural representation | BMC Bioinformatics | Full Text
Modelling peptide–protein complexes: docking, simulations and machine learning | QRB Discovery | Cambridge Core
HitPredict - High confidence protein-protein interactions
GitHub - maxibor/protinter: Protein interaction calculator
Computational prediction of protein interfaces: A review of data driven methods - ScienceDirect
Software for Deep Analysis of PDB Structures and Mechanism Discovery
BindML+: Software for Predicting and Classifying Protein-Protein Interaction Sites
BindML: Software for Predicting Protein-Protein Interaction Sites using Phylogenetic Substitution Models
Get PDB intermolecular protein contacts and interface residues | Oxford Protein Informatics Group
PDF) PIC: Protein Interactions Calculator
